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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910312.1_cds_XP_016460372.1_53799
CDS Infomation

[gene=LOC107783857] [db_xref=GeneID:107783857] [protein=protein PHR1-LIKE 1-like] [protein_id=XP_016460372.1] [location=complement(join(48696..49052,49972..50041,50565..50622,50970..51009,51097..51173,51252..51426,52034..52651))] [gbkey=CDS]
Sequence

ATGCGGCCTGCATTATATATGCCAAGATCTAGTGAAGCACAGCACAGTAGCATGGGTGTC
TCTGGAGCTACGCCTACGTCTTTACCCAGTTTGCCCAAATTGGAGGAGAGATTTCCCAAA
TTGCCAGATTCTCTTCATGTCATCTCAGAGAAGGAGCTAACTGCAAGCTTCATTTCTCCA
CGGGCAATTTCATCGACGTCAAAGAGTGGAACAGTTGGGCACCTATTGTCATCCACTTCT
GGACCCCACAGAGATTTTCACTTTTTACCTTCCTCTCCTCAAGAAACTCGGCCACGTTAC
TATCCATTTATCTCAAGTGGGGCTTCTATGTCACCCAGCCAAGCTTCACACTCAAGTGTA
CATTCTACCTCGTTGAATACCGACCCCTTGGGGAACCACAAACAGAATTCATTTCATGAG
TTTCTTGCTTTTCCTACAAATGTTCCTGTTCAAAATGGCCAAGTGGAAAGCCTTGCCAGC
GTCATGACATCCGATGATGGTGTTAAGAGATCTGATTGGCAGGACTGGGCTGATCAGCTA
ATTAACGATGATGACACTCTCGGTTCAAGCTGGAGTGATATCCTAGTAGATGTCAATTTT
CCAGATCCAGAACCTAAGCTGTTTGAGATCCCTGCGAAACAGCCGCAACTTCCTCCTCCT
GCTCCTGCTTCATCGGGGCAAAGCTGCCCAGTTGGTAGCCCATCATCTTCCACATCTAAG
CCTCGAATGCGGTGGACCCCAGAGCTTCACGAAGTTTTTGTAGAAGCTGTCAATAAGCTT
GGTGGCAGCGAAAAAGCTACTCCGAAGGGTGTCTTGAAGCTCATGAATGTGGAAAGCTTA
ACCATCTATCATGTTAAAAGCCACTTGCAGAAATATAGGACTGCCAGATACAAACCAGAT
CCCTCTGAAGGAATTTCAGAAAAGAAGCCAACTATCGTCACGGAGATGCCATCTCTGGAC
TTAAAAACGACTATGGGGATAACAGAAGCATTGAAAATGCAGATGGAAGTGCAGAAACAG
CTTCATGAACAACTTGAGATCCAAAGAAAGTTACAGCTGCGGATTGAAGAACAGGGGAAA
TACCTTCAGATGATGTTTGAGAAGACGAAAAACATGGGGAAAGAACTAAATGTATCATCA
TCAAAATCAGAGGAACCTCCTTCACCATCCACAGAAATAAATCATTCCCTTCCTGATGAT
AAATCAGACGCCCCCGAGCAGGATCATGTCAGCGTTGGTTCAAGTGATGCTTCAAGATCT
CTAGAGGATCTTACCAAGAACAATGAACGAAAGTCGCCCAAAAGGAAAGCATGTGAGAGT
CATGACACGGACGTTAGAGACTTAAGTTCCCTTCCAGCAGAAGGTGCAAAATCGGAGGAA
ATGTCACCTTCATGA

Peptide Sequence

PEP ID

XP_016460372.1
PEP Infomation

PREDICTED: protein PHR1-LIKE 1-like [Nicotiana tabacum]
Sequence

MRPALYMPRSSEAQHSSMGVSGATPTSLPSLPKLEERFPKLPDSLHVISEKELTASFISP
RAISSTSKSGTVGHLLSSTSGPHRDFHFLPSSPQETRPRYYPFISSGASMSPSQASHSSV
HSTSLNTDPLGNHKQNSFHEFLAFPTNVPVQNGQVESLASVMTSDDGVKRSDWQDWADQL
INDDDTLGSSWSDILVDVNFPDPEPKLFEIPAKQPQLPPPAPASSGQSCPVGSPSSSTSK
PRMRWTPELHEVFVEAVNKLGGSEKATPKGVLKLMNVESLTIYHVKSHLQKYRTARYKPD
PSEGISEKKPTIVTEMPSLDLKTTMGITEALKMQMEVQKQLHEQLEIQRKLQLRIEEQGK
YLQMMFEKTKNMGKELNVSSSKSEEPPSPSTEINHSLPDDKSDAPEQDHVSVGSSDASRS
LEDLTKNNERKSPKRKACESHDTDVRDLSSLPAEGAKSEEMSPS

Transcript Sequence

Gene sequence data has not been registered.